Insertion junction: LMJ.RY0402.106841_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:+
Strain:LMJ.RY0402.106841
Chromosome:chromosome 12
Location:6257003
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre12.g537000 (1 of 1) PF02041 - Auxin binding protein (Auxin_BP) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGAAAGACAGCTCCGGGCGGCATCGTCAG
Internal bar code:TGACGGCGTGACTCGAATATAC

Confirmation - LEAP-Seq

LEAP-Seq distance:583
LEAP-Seq percent confirming:99.187
LEAP-Seq n confirming:122
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:1

Suggested primers for confirmation by PCR

Suggested primer 1:TCGATAGCTGTGGTTTGCTG
Suggested primer 2:GCCAGCAGCTAGTTCATTCC