Insertion junction: LMJ.RY0402.106844_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.106844
Chromosome:chromosome 9
Location:3371548
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre09.g388726 (1 of 1) 3.1.3.32 - Polynucleotide 3'-phosphatase / 2'(3')-polynucleotidase 3'UTR|outside_mRNA

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCAGGATGTCGCACAACCTTACAGTTCCGG
Internal bar code:CACTCGTGATTACGACGAACTG

Confirmation - LEAP-Seq

LEAP-Seq distance:761
LEAP-Seq percent confirming:98.9366
LEAP-Seq n confirming:2233
LEAP-Seq n nonconfirming:24
LEAP-Seq n unique pos:13

Suggested primers for confirmation by PCR

Suggested primer 1:CTCTGAGCCTTACACCAGCC
Suggested primer 2:CTCTGGCCAACTTGAAGGAG