Insertion junction: LMJ.RY0402.106880_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.106880
Chromosome:chromosome 8
Location:4376798
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre08.g381800 (1 of 2) 5.3.3.2 - Isopentenyl-diphosphate Delta-isomerase / Methylbutenylpyrophosphate isomerase 5'UTR/5'UTR_intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTTTTGCAAGCACCAGCAAGCGCCGCGCCT
Internal bar code:TCTTGCCTACGTTGTTACGGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1118
LEAP-Seq percent confirming:99.2519
LEAP-Seq n confirming:3582
LEAP-Seq n nonconfirming:27
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:GCAAGGAGAACTTGACGGAG
Suggested primer 2:CCAGCCCAAACTAAACCAAA