Insertion junction: LMJ.RY0402.107146_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.107146
Chromosome:chromosome 16
Location:6263359
Confidence (%):58
Locus systematic id Locus common name Defline Feature
Cre16.g674850 (1 of 1) PTHR14625//PTHR14625:SF3 - MICROCEPHALIN // MICROCEPHALIN CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCATGCCGTGCAGCCAGCGCGACTGACGC
Internal bar code:AGACCTGGACGGTCTGCTGCCC

Confirmation - LEAP-Seq

LEAP-Seq distance:174
LEAP-Seq percent confirming:99.7273
LEAP-Seq n confirming:1097
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:CTTACGTCACGTCGCACTGT
Suggested primer 2:GTGGGTGGGGTGATTTGTAG