Insertion junction: LMJ.RY0402.107328_3

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:+
Strain:LMJ.RY0402.107328
Chromosome:chromosome 3
Location:8559449
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre03.g202001 (1 of 7) IPR011989//IPR016024 - Armadillo-like helical // Armadillo-type fold 5'UTR_intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCTCAAGATGGATGTTAATGATTAACTGAA
Internal bar code:GCCCGCCTCTCTTGTATCCCGT

Confirmation - LEAP-Seq

LEAP-Seq distance:127
LEAP-Seq percent confirming:14.6594
LEAP-Seq n confirming:1922
LEAP-Seq n nonconfirming:11189
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:CTAAGCCTCCCAACATAGCG
Suggested primer 2:TTGCGTGACTCGAGTGGTAG