Insertion junction: LMJ.RY0402.107348_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.107348
Chromosome:chromosome 3
Location:2505784
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre03.g159800 (1 of 1) PTHR21262//PTHR21262:SF0 - GUANOSINE-3',5'-BIS DIPHOSPHATE 3'-PYROPHOSPHOHYDROLASE // GUANOSINE-3',5'-BIS(DIPHOSPHATE) 3'-PYROPHOSPHOHYDROLASE MESH1 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCCACGATGGCTCTCTAAGCACCGCGCCCG
Internal bar code:AATGATCCCACGAGGGGACAGA

Confirmation - LEAP-Seq

LEAP-Seq distance:652
LEAP-Seq percent confirming:92.9204
LEAP-Seq n confirming:420
LEAP-Seq n nonconfirming:32
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:CCTCTGTGCCACTCTGAACA
Suggested primer 2:AGAAGGTCCTGCTCCTGTGA