Insertion junction: LMJ.RY0402.107687_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.107687
Chromosome:chromosome 5
Location:866533
Confidence (%):58
Locus systematic id Locus common name Defline Feature
Cre05.g247650 (1 of 32) IPR000536 - Nuclear hormone receptor, ligand-binding domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGACAGGCAACGCGGGCCACCAACACACCA
Internal bar code:TTCGCGGGGGGGGCCGTCGCAA

Confirmation - LEAP-Seq

LEAP-Seq distance:295
LEAP-Seq percent confirming:99.1521
LEAP-Seq n confirming:1871
LEAP-Seq n nonconfirming:16
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:GCTGCGATGTCTGGTACTGA
Suggested primer 2:ATACGACACCACCTCCTTCG