Insertion junction: LMJ.RY0402.108007_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:+
Strain:LMJ.RY0402.108007
Chromosome:chromosome 9
Location:5628225
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre09.g401034 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTTCGGTTGCGTCGGGTTGGGTTTAGACAT
Internal bar code:GTGGGGTTCCGTGTAGGAGACT

Confirmation - LEAP-Seq

LEAP-Seq distance:1224
LEAP-Seq percent confirming:63.4518
LEAP-Seq n confirming:125
LEAP-Seq n nonconfirming:72
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:ACCTCTCGGGTACCAGTCCT
Suggested primer 2:TTTGAACCTGACGACGAGTG