Insertion junction: LMJ.RY0402.108007_2

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.108007
Chromosome:chromosome 9
Location:5628230
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre09.g401034 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTACATTATCTGTACGACCGACAGTCACGT
Internal bar code:GATTGGGGTTGATCTGGCATGA

Confirmation - LEAP-Seq

LEAP-Seq distance:573
LEAP-Seq percent confirming:41.2469
LEAP-Seq n confirming:827
LEAP-Seq n nonconfirming:1178
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:ACCTCTCGGGTACCAGTCCT
Suggested primer 2:TTTGAACCTGACGACGAGTG