Insertion junction: LMJ.RY0402.108226_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.108226
Chromosome:chromosome 17
Location:2967413
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre17.g720150 (1 of 1) IPR000104//IPR008752 - Antifreeze protein, type I // Peptidase M11, gametolysin CDS/intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGAAGCGCAAGGTTGTGTAATCATGATTT
Internal bar code:GGTGGCTCTTACTGGTTGAATG

Confirmation - LEAP-Seq

LEAP-Seq distance:357
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:65
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:CCCAGCTCGTGTAGGTAGGA
Suggested primer 2:AGTCGTTCACGGACTTCCC