Insertion junction: LMJ.RY0402.108230_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.108230
Chromosome:chromosome 14
Location:2524947
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre14.g625350 MAE17 MATE efflux family protein; (1 of 3) PTHR11206:SF95 - MULTI ANTIMICROBIAL EXTRUSION FAMILY PROTEIN intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTACGCGATCACTCGTCTTACAACGCCTGA
Internal bar code:CTAGACCTAGCCGCCCTTCGTA

Confirmation - LEAP-Seq

LEAP-Seq distance:469
LEAP-Seq percent confirming:97.619
LEAP-Seq n confirming:164
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:TGGGTCTAGGTTTGGGTCTG
Suggested primer 2:GCAACCGACGTTTACCCTAA