Insertion junction: LMJ.RY0402.108292_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.108292
Chromosome:chromosome 13
Location:2229714
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre13.g578550 (1 of 3) IPR000104//IPR011009 - Antifreeze protein, type I // Protein kinase-like domain 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGTGGTTTGTGGTTGTGGGCGGCCTGCTG
Internal bar code:TGACCGCTGGTCGTAAGGATGTT

Confirmation - LEAP-Seq

LEAP-Seq distance:686
LEAP-Seq percent confirming:99.0229
LEAP-Seq n confirming:3547
LEAP-Seq n nonconfirming:35
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:GGTGCCAGTCACCTGTACCT
Suggested primer 2:TGATTAGGAAGGATCGTGGC