Insertion junction: LMJ.RY0402.108424_2

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.108424
Chromosome:chromosome 3
Location:5613211
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre03.g187000 (1 of 1) PF12325//PF12329 - TATA element modulatory factor 1 TATA binding (TMF_TATA_bd) // TATA element modulatory factor 1 DNA binding (TMF_DNA_bd) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTTCGTCCGCCCTCCCTGCAAACCCACGCA
Internal bar code:CGGTGTGCTACTAGCGACGGCT

Confirmation - LEAP-Seq

LEAP-Seq distance:693
LEAP-Seq percent confirming:98.9305
LEAP-Seq n confirming:1110
LEAP-Seq n nonconfirming:12
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:CTCCGACAGGACCTACAAGC
Suggested primer 2:AATGGAGTGGAGTGAGGTGG