Insertion junction: LMJ.RY0402.108431_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.108431
Chromosome:chromosome 16
Location:555962
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre16.g692500 (1 of 19) PTHR31251:SF1 - SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 10-RELATED 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTCAAACAAAGATGTGGTCCTGTCATCCAT
Internal bar code:TTTATGGACGGCCTAAGGGTAA

Confirmation - LEAP-Seq

LEAP-Seq distance:859
LEAP-Seq percent confirming:99.0953
LEAP-Seq n confirming:1862
LEAP-Seq n nonconfirming:17
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:GGCAGGCAGTACGGTTGTAT
Suggested primer 2:CATTGCTGGGTTGGTAGCTT