Insertion junction: LMJ.RY0402.108458_2

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.108458
Chromosome:chromosome 3
Location:8200959
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre03.g200050 CAL1 (1 of 2) PF13202//PF13833 - EF hand (EF-hand_5) // EF-hand domain pair (EF-hand_8); Calpain family cysteine protease CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCCTGCGCACATGCCGACAGGATCGTGTT
Internal bar code:CTTCCTATAATGCGTCAGATGC

Confirmation - LEAP-Seq

LEAP-Seq distance:223
LEAP-Seq percent confirming:97.619
LEAP-Seq n confirming:41
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:1

Suggested primers for confirmation by PCR

Suggested primer 1:CGTTACATCACGGCATGTTC
Suggested primer 2:CACCGTACACGACAAAATCG