Insertion junction: LMJ.RY0402.108588_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:+
Strain:LMJ.RY0402.108588
Chromosome:chromosome 16
Location:5163799
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre16.g683400 (1 of 10) PTHR10174 - RETINALDEHYDE BINDING PROTEIN-RELATED 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCTTGGTTCGCGGTGTGCAGCTAGGTTGGC
Internal bar code:GGAGGGCTGGGCTACCTAGTTT

Confirmation - LEAP-Seq

LEAP-Seq distance:460
LEAP-Seq percent confirming:97.3364
LEAP-Seq n confirming:2558
LEAP-Seq n nonconfirming:70
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:TCCAGTGCGTCTCTGTATCG
Suggested primer 2:CCATGTAAGCGGGTTCACTT