Insertion junction: LMJ.RY0402.108702_2

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.108702
Chromosome:chromosome 16
Location:394149
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre16.g693601 ISG-C2,ISG2 (1 of 5) PTHR16631//PTHR16631:SF9 - FAMILY NOT NAMED // GLUCAN 1,3-BETA-GLUCOSIDASE; Hydroxyproline-rich cell wall protein CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCGGATCTCAGCATGGCGACGGGCTACGTG
Internal bar code:TGCTCTGAAGACAAACTTGGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:286
LEAP-Seq percent confirming:99.4169
LEAP-Seq n confirming:1364
LEAP-Seq n nonconfirming:8
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:AGGAGAGGGAGAAGGAGACG
Suggested primer 2:TTCATTTCCCATGCTCCTTC