Insertion junction: LMJ.RY0402.109028_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.109028
Chromosome:chromosome 9
Location:1828695
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre09.g395950 AOX1 Alternative oxidase, mitochondrial; (1 of 2) PTHR31803//PTHR31803:SF3 - FAMILY NOT NAMED // ALTERNATIVE OXIDASE intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATTGCTCCCACCACCGCTACTGCTACCACT
Internal bar code:TGGGTACAGCACGCGGTCGTGC

Confirmation - LEAP-Seq

LEAP-Seq distance:690
LEAP-Seq percent confirming:99.2826
LEAP-Seq n confirming:1799
LEAP-Seq n nonconfirming:13
LEAP-Seq n unique pos:22

Suggested primers for confirmation by PCR

Suggested primer 1:AACCTGAAGAGAGGCACGAA
Suggested primer 2:GCGTAAATCCTCTCTCGCAC