Insertion junction: LMJ.RY0402.109052_2

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.109052
Chromosome:chromosome 12
Location:8329558
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre12.g549600 (1 of 96) IPR019734 - Tetratricopeptide repeat intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCTGGGCCTCAGGTGATTGGGCTTGGCCGC
Internal bar code:TTCTTGTTGGTTGTAGTGATC

Confirmation - LEAP-Seq

LEAP-Seq distance:291
LEAP-Seq percent confirming:99.6826
LEAP-Seq n confirming:3141
LEAP-Seq n nonconfirming:10
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:CTTGTGTGCGTGTGTGTCAG
Suggested primer 2:TTTGGTTTAGTTTGGGCTGG