Insertion junction: LMJ.RY0402.109076_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.109076
Chromosome:chromosome 1
Location:5047249
Confidence (%):58
Locus systematic id Locus common name Defline Feature
Cre01.g034900 CDPK5 (1 of 4) PTHR24347:SF138 - PROTEIN F32D8.1; Calcium/calmodulin-dependent protein kinase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCGCCGTTCTCATGTCGCAACCAGCGTAAA
Internal bar code:CGGGGACTCGGAGTACAGTGTT

Confirmation - LEAP-Seq

LEAP-Seq distance:232
LEAP-Seq percent confirming:92.1687
LEAP-Seq n confirming:306
LEAP-Seq n nonconfirming:26
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:CGTCCTTGATGCTCTTGTCA
Suggested primer 2:GAGTTAGGAAGGTCAGGGGC