Insertion junction: LMJ.RY0402.109122_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.109122
Chromosome:chromosome 11
Location:503066
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre11.g467597 (1 of 1) IPR000104//IPR003439//IPR003593//IPR013525//IPR013581//IPR027417 - Antifreeze protein, type I // ABC transporter-like // AAA+ ATPase domain // ABC-2 type transporter // Plant PDR ABC transporter associated // P-loop containing nucleoside triphosphate hydrolase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GATGGGGTTTTGTTTTGTTGGGGGGCTACA
Internal bar code:GGGCTGTACAGGGGGTACGGCT

Confirmation - LEAP-Seq

LEAP-Seq distance:453
LEAP-Seq percent confirming:98.8613
LEAP-Seq n confirming:2431
LEAP-Seq n nonconfirming:28
LEAP-Seq n unique pos:14

Suggested primers for confirmation by PCR

Suggested primer 1:TCGTCAGATGCGTACTCCTG
Suggested primer 2:TGGCTACAACTCCGCTTCTT