Insertion junction: LMJ.RY0402.109331_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.109331
Chromosome:chromosome 1
Location:6101752
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre01.g043550 (1 of 3) IPR000104//IPR004333 - Antifreeze protein, type I // Transcription factor, SBP-box 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCTACCTCAGTCACAGCATACAGTATTGGC
Internal bar code:ACCAATTCCGTCTCTCGCGGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:609
LEAP-Seq percent confirming:90.2812
LEAP-Seq n confirming:2183
LEAP-Seq n nonconfirming:235
LEAP-Seq n unique pos:22

Suggested primers for confirmation by PCR

Suggested primer 1:TGGAACTTCATACGCAGCAG
Suggested primer 2:GCACCTTTCGCTTTCTAACG