Insertion junction: LMJ.RY0402.109345_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.109345
Chromosome:chromosome 13
Location:2017314
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre13.g576800 PHX21,HIF1,HIF (1 of 1) K09592 - hypoxia-inducible factor prolyl hydroxylase (EGLN, HPH); Cytosolic prolyl 4-hydroxylase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTCGGGCAGGGTAGGGAGTGTGGGATGCAG
Internal bar code:GATCGCTGCGACGTTCGTACCG

Confirmation - LEAP-Seq

LEAP-Seq distance:674
LEAP-Seq percent confirming:92.8924
LEAP-Seq n confirming:2261
LEAP-Seq n nonconfirming:173
LEAP-Seq n unique pos:19

Suggested primers for confirmation by PCR

Suggested primer 1:CTATACCGCTTTCCCAACCA
Suggested primer 2:ATAAGGGTTGCAGTTGCAGG