Insertion junction: LMJ.RY0402.109365_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.109365
Chromosome:chromosome 8
Location:574080
Confidence (%):58
Locus systematic id Locus common name Defline Feature
Cre08.g359500 (1 of 1) 6.3.2.4 - D-alanine--D-alanine ligase / D-alanylalanine synthetase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCTCCTCCCCTCGGACGCATGGCCCACCTC
Internal bar code:CTACGCTCTCCACTAGATGACA

Confirmation - LEAP-Seq

LEAP-Seq distance:505
LEAP-Seq percent confirming:51.1632
LEAP-Seq n confirming:5828
LEAP-Seq n nonconfirming:5563
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:GTCACCAAAGCACAAAGGGT
Suggested primer 2:CCAGCCTCCATATCCTGTGT