Insertion junction: LMJ.RY0402.109718_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.109718
Chromosome:chromosome 8
Location:2546126
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre08.g372300 (1 of 1) IPR000104//IPR000620 - Antifreeze protein, type I // EamA domain 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAGAAAGCAGCGCGGCGCGACACCCACGCG
Internal bar code:GCGATAGACTAAGTGTGCCAGG

Confirmation - LEAP-Seq

LEAP-Seq distance:261
LEAP-Seq percent confirming:96.8191
LEAP-Seq n confirming:2922
LEAP-Seq n nonconfirming:96
LEAP-Seq n unique pos:17

Suggested primers for confirmation by PCR

Suggested primer 1:CGTGTCTCCTCCTTCGTCTC
Suggested primer 2:CAGTTGTCTTGGTGGGGACT