Insertion junction: LMJ.RY0402.109763_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.109763
Chromosome:chromosome 2
Location:5239157
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre02.g106100 (1 of 1) IPR000104//IPR029058//IPR029059 - Antifreeze protein, type I // Alpha/Beta hydrolase fold // Alpha/beta hydrolase fold-5 5'UTR_intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CATGTTTGCAAAGGCCAAAAAGCAAGAAGC
Internal bar code:AATGCGGGTGCACCTCGCTGG

Confirmation - LEAP-Seq

LEAP-Seq distance:562
LEAP-Seq percent confirming:88.7465
LEAP-Seq n confirming:1593
LEAP-Seq n nonconfirming:202
LEAP-Seq n unique pos:13

Suggested primers for confirmation by PCR

Suggested primer 1:GGTGGTGGATGTGAAGCTCT
Suggested primer 2:CAAAATTGGTTCTGCACACG