Insertion junction: LMJ.RY0402.109763_2

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:+
Strain:LMJ.RY0402.109763
Chromosome:chromosome 2
Location:5239159
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre02.g106100 (1 of 1) IPR000104//IPR029058//IPR029059 - Antifreeze protein, type I // Alpha/Beta hydrolase fold // Alpha/beta hydrolase fold-5 5'UTR_intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCTTAACGCGCGTTTGGGTCCGCGCTTTC
Internal bar code:AGTGCTTGCGTCTCCATAGTTC

Confirmation - LEAP-Seq

LEAP-Seq distance:196
LEAP-Seq percent confirming:93.617
LEAP-Seq n confirming:220
LEAP-Seq n nonconfirming:15
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:GGTGGTGGATGTGAAGCTCT
Suggested primer 2:CAAAATTGGTTCTGCACACG