Insertion junction: LMJ.RY0402.109883_2

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:+
Strain:LMJ.RY0402.109883
Chromosome:chromosome 5
Location:997918
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre05.g246600 (1 of 1) IPR001781//IPR027377 - Zinc finger, LIM-type // Zinc-binding domain gene_edge/mRNA_edge/3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCTGCGCGATTGCTGCCATGGGAAGTCCGC
Internal bar code:TCGACCATCTCTTCATTCTCA

Confirmation - LEAP-Seq

LEAP-Seq distance:1068
LEAP-Seq percent confirming:99.5333
LEAP-Seq n confirming:853
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:CAGGAATAGCCCAGCTTCTG
Suggested primer 2:GTGTGATGGGATGACAGTGC