Insertion junction: LMJ.RY0402.109886_2

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.109886
Chromosome:chromosome 7
Location:5935671
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre07.g354250 PGK2 (1 of 2) PF00162 - Phosphoglycerate kinase (PGK); Phosphoglycerate kinase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGTAAACCGTCGCTTTGCTGCATCGCATAT
Internal bar code:GTGACGGATAAGTCCACGCGCAG

Confirmation - LEAP-Seq

LEAP-Seq distance:518
LEAP-Seq percent confirming:50.9983
LEAP-Seq n confirming:2120
LEAP-Seq n nonconfirming:2037
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:AGGTGACGGCTTATGCAAAC
Suggested primer 2:CTGTGGAGATGTGGGTGATG