Insertion junction: LMJ.RY0402.109938_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.109938
Chromosome:chromosome 4
Location:1360036
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre04.g214501 PNP1,PNT2 Chloroplast polyribonucleotide phosphorylase; (1 of 1) 2.7.7.8 - Polyribonucleotide nucleotidyltransferase / Polynucleotide phosphorylase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTTTTTTCATAGCGTTCTCCTTGTCCCTTT
Internal bar code:GCCATACGCGTTACCTAGTCTG

Confirmation - LEAP-Seq

LEAP-Seq distance:396
LEAP-Seq percent confirming:99.1427
LEAP-Seq n confirming:2313
LEAP-Seq n nonconfirming:20
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:CCTCGCTGAGTAAGGAGGTG
Suggested primer 2:TGCGTTTCCCTAACCGTAAC