Insertion junction: LMJ.RY0402.110291_2

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.110291
Chromosome:chromosome 1
Location:4623870
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre01.g031800 (1 of 1) PTHR23083//PTHR23083:SF433 - TETRATRICOPEPTIDE REPEAT PROTEIN, TPR // SUBFAMILY NOT NAMED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCAAACCACCCCATCTCTGCAGCCGGCCAG
Internal bar code:TGGCGCTCCGGCCTCCCACTGA

Confirmation - LEAP-Seq

LEAP-Seq distance:661
LEAP-Seq percent confirming:99.1328
LEAP-Seq n confirming:3315
LEAP-Seq n nonconfirming:29
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:TATATGTGCGGCAGGTGTGT
Suggested primer 2:GATAGGAGCATTGGGGACAA