Insertion junction: LMJ.RY0402.110395_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.110395
Chromosome:chromosome 10
Location:6433316
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre10.g465950 CGL148 Conserved in the Green Lineage; (1 of 1) K12846 - U4/U6.U5 tri-snRNP-associated protein 3 (SNRNP27) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGTCCCCAAACTTTGACAGCCTGATAGACC
Internal bar code:GCTGTGCCGTCGTGCACTTCCC

Confirmation - LEAP-Seq

LEAP-Seq distance:250
LEAP-Seq percent confirming:99.2015
LEAP-Seq n confirming:2733
LEAP-Seq n nonconfirming:22
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:TGATGCAGGTGTGGAGGTTA
Suggested primer 2:ACGACACCATAAGTGCCCTC