Insertion junction: LMJ.RY0402.110446_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.110446
Chromosome:chromosome 1
Location:1059010
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre01.g006150 EFG9,PRFC1, PRFC1,PRF3 (1 of 1) PTHR23115//PTHR23115:SF69 - TRANSLATION FACTOR // PEPTIDE CHAIN RELEASE FACTOR 3; Putative chloroplast translation peptide-chain release factor 3 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGATGCCCGTATGGCTGAATGTCAACACCG
Internal bar code:GCTGACTGGGTGCTTCGGAGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:626
LEAP-Seq percent confirming:98.8372
LEAP-Seq n confirming:85
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:GCTCTCCACAGATATCCCCA
Suggested primer 2:CTCAGGCAAGTTCGAGAAGG