Insertion junction: LMJ.RY0402.110586_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.110586
Chromosome:chromosome 1
Location:2140074
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre01.g011630 (1 of 1) IPR001283//IPR002413//IPR003882//IPR014044 - Cysteine-rich secretory protein, allergen V5/Tpx-1-related // Ves allergen // Pistil-specific extensin-like protein // CAP domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGGCTAGGGCGGGCTCCGTATGAGGCCAAA
Internal bar code:TCTATAGGGTGTATGGATGATT

Confirmation - LEAP-Seq

LEAP-Seq distance:823
LEAP-Seq percent confirming:99.4359
LEAP-Seq n confirming:2468
LEAP-Seq n nonconfirming:14
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:AAAACAAACGCAGTTCACCC
Suggested primer 2:GACAGCACCAACATGTACCG