Insertion junction: LMJ.RY0402.110628_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.110628
Chromosome:chromosome 3
Location:5376365
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre03.g184500 (1 of 2) PTHR33925:SF3 - PROTEIN ACCUMULATION AND REPLICATION OF CHLOROPLASTS 6, CHLOROPLASTIC intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCTTACCTAACCGGATCATGTGCACCACGC
Internal bar code:GCTGAGGCCTCCCGTGACATTG

Confirmation - LEAP-Seq

LEAP-Seq distance:230
LEAP-Seq percent confirming:97.6744
LEAP-Seq n confirming:294
LEAP-Seq n nonconfirming:7
LEAP-Seq n unique pos:1

Suggested primers for confirmation by PCR

Suggested primer 1:TAAGTGGTGAGCTTCATGCG
Suggested primer 2:ACACACCTGGACACTCTCCC