Insertion junction: LMJ.RY0402.110705_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.110705
Chromosome:chromosome 1
Location:5197068
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre01.g036150 (1 of 1) PTHR14095:SF0 - PROTEIN C06G1.5, ISOFORM B 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGGATGACAACGCGTAGTCCATATAACGCA
Internal bar code:GATGCACCCGGTCGGACAGATC

Confirmation - LEAP-Seq

LEAP-Seq distance:344
LEAP-Seq percent confirming:96.8603
LEAP-Seq n confirming:617
LEAP-Seq n nonconfirming:20
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:TTCGCTCAGACTTCCCTTGT
Suggested primer 2:TCTCTCCCACCACCACTAGG