Insertion junction: LMJ.RY0402.110768_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:+
Strain:LMJ.RY0402.110768
Chromosome:chromosome 17
Location:4123726
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre17.g729600 (1 of 11) IPR001471//IPR016177//IPR031112 - AP2/ERF domain // DNA-binding domain // AP2-like ethylene-responsive transcription factor CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCCTGCTCCTCGCCCTCCGCATCCGCATCT
Internal bar code:TCTCCCTCGGTAGTGTCCCCGC

Confirmation - LEAP-Seq

LEAP-Seq distance:448
LEAP-Seq percent confirming:94.544
LEAP-Seq n confirming:1213
LEAP-Seq n nonconfirming:70
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:GAGCAGCACAAGGTGTGTGT
Suggested primer 2:TGCTGCTCCGTAAGTTCCTT