Insertion junction: LMJ.RY0402.110839_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.110839
Chromosome:chromosome 2
Location:4156422
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre02.g098150 XYK1 (1 of 1) 2.7.1.17 - Xylulokinase / Xylulose kinase; Xylulose kinase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACACACGGTCACGGCCGCCACATCAAAATG
Internal bar code:GTTGACTCGAGGACCTTTCCTT

Confirmation - LEAP-Seq

LEAP-Seq distance:671
LEAP-Seq percent confirming:98.5141
LEAP-Seq n confirming:3116
LEAP-Seq n nonconfirming:47
LEAP-Seq n unique pos:15

Suggested primers for confirmation by PCR

Suggested primer 1:CTGTGTGGTGCAGTAGGCAT
Suggested primer 2:CACCGTTCCCTGTAAGCAAT