Insertion junction: LMJ.RY0402.110839_2

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.110839
Chromosome:chromosome 2
Location:4156435
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre02.g098150 XYK1 (1 of 1) 2.7.1.17 - Xylulokinase / Xylulose kinase; Xylulose kinase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGTCCCACGTCTGCGCATTGCCCTGCACAT
Internal bar code:AAATTCATCTCGTTGCAAACTT

Confirmation - LEAP-Seq

LEAP-Seq distance:577
LEAP-Seq percent confirming:99.7028
LEAP-Seq n confirming:671
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:CTGTGTGGTGCAGTAGGCAT
Suggested primer 2:CACCGTTCCCTGTAAGCAAT