Insertion junction: LMJ.RY0402.110874_2

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.110874
Chromosome:chromosome 1
Location:4578563
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre01.g031300 CDPK4 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATTTCTTCTGAAGCTTTGCCCCGCACACGC
Internal bar code:TCCGGTTTTGAGTCCGAAACCG

Confirmation - LEAP-Seq

LEAP-Seq distance:380
LEAP-Seq percent confirming:73.7119
LEAP-Seq n confirming:1402
LEAP-Seq n nonconfirming:500
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:ATGGGTGGCACGAGACTTAC
Suggested primer 2:GGCTGCACACACATCCATAC