Insertion junction: LMJ.RY0402.110875_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.110875
Chromosome:chromosome 16
Location:2071368
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre16.g657350 SNRK2I (1 of 4) PTHR24343//PTHR24343:SF167 - SERINE/THREONINE KINASE // SUBFAMILY NOT NAMED; snRK1 family in Chlamydomonas, subgroup 2 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCACATGATCATCCTACCCGACTGCCCATT
Internal bar code:AGGAATGCGCGGATCGCGGACT

Confirmation - LEAP-Seq

LEAP-Seq distance:647
LEAP-Seq percent confirming:97.9286
LEAP-Seq n confirming:3262
LEAP-Seq n nonconfirming:69
LEAP-Seq n unique pos:23

Suggested primers for confirmation by PCR

Suggested primer 1:TGCGACAGCATTCAACTTTC
Suggested primer 2:TGAAGATGACAAGCAGCACC