Insertion junction: LMJ.RY0402.111199_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.111199
Chromosome:chromosome 6
Location:7524902
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre06.g300600 (1 of 19) PTHR31251:SF1 - SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 10-RELATED 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGACGGTGGAAAGGCGCAGGACGGTTGGG
Internal bar code:CGGCTACATTGTTGCCCCCAGC

Confirmation - LEAP-Seq

LEAP-Seq distance:738
LEAP-Seq percent confirming:90.3712
LEAP-Seq n confirming:3116
LEAP-Seq n nonconfirming:332
LEAP-Seq n unique pos:16

Suggested primers for confirmation by PCR

Suggested primer 1:CCCAGTTGGCACCTGTCTAT
Suggested primer 2:GACTGAACGGCTGTAGCCTC