Insertion junction: LMJ.RY0402.111251_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.111251
Chromosome:chromosome 7
Location:4124867
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre07.g342800 CGL16 (1 of 1) PF07063 - Domain of unknown function (DUF1338) (DUF1338); Conserved in the Green Lineage 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCCATATGTTAGTTAACTGACGCATTACTC
Internal bar code:GAACCAGGCGTGGCGGTAGCCA

Confirmation - LEAP-Seq

LEAP-Seq distance:606
LEAP-Seq percent confirming:98.6127
LEAP-Seq n confirming:853
LEAP-Seq n nonconfirming:12
LEAP-Seq n unique pos:13

Suggested primers for confirmation by PCR

Suggested primer 1:AGCCTATACGTGCCCAAATG
Suggested primer 2:TGAATGACCGACTGAGCTTG