Insertion junction: LMJ.RY0402.111284_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.111284
Chromosome:chromosome 11
Location:1404916
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre11.g467723 KAS1 (1 of 1) PTHR11712//PTHR11712:SF226 - POLYKETIDE SYNTHASE-RELATED // 3-OXOACYL-[ACYL-CARRIER-PROTEIN] SYNTHASE I, CHLOROPLASTIC; 3-ketoacyl-ACP-synthase 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTTCTCCCGCAAGACACTCTTCATTGCAAC
Internal bar code:GATCCGCGTCAGAGGCGCCCGC

Confirmation - LEAP-Seq

LEAP-Seq distance:661
LEAP-Seq percent confirming:99.0527
LEAP-Seq n confirming:5228
LEAP-Seq n nonconfirming:50
LEAP-Seq n unique pos:41

Suggested primers for confirmation by PCR

Suggested primer 1:CTCCTCTGAGGTTCCTGTCG
Suggested primer 2:CTCAAATTCGAGTCCTTCGC