Insertion junction: LMJ.RY0402.111388_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:+
Strain:LMJ.RY0402.111388
Chromosome:chromosome 6
Location:2049585
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre06.g264550 CGL81 (1 of 4) PF09366 - Protein of unknown function (DUF1997) (DUF1997); Conserved in the Green Lineage CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTTCTGCATCACGCCGCTGCCGGCGCTCGA
Internal bar code:TGTGGTTCTGACCGAATCGGCG

Confirmation - LEAP-Seq

LEAP-Seq distance:769
LEAP-Seq percent confirming:99.7318
LEAP-Seq n confirming:3347
LEAP-Seq n nonconfirming:9
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:GAGGCCTTTAGGGAAAGGTG
Suggested primer 2:AAATGCAGCATGTTGCTCAG