Insertion junction: LMJ.RY0402.111406_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:+
Strain:LMJ.RY0402.111406
Chromosome:chromosome 4
Location:3486464
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre04.g227900 PF20 WD-repeat protein of flagellum central pair; (1 of 6) IPR001680//IPR015943//IPR017986//IPR020472 - WD40 repeat // WD40/YVTN repeat-like-containing domain // WD40-repeat-containing domain // G-protein beta WD-40 repeat intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGTCCCACCGCCCCGCTCACAGCCCGTTCC
Internal bar code:CTAGTCGTTGTTTCGTCAGTAT

Confirmation - LEAP-Seq

LEAP-Seq distance:116
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:20
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:1

Suggested primers for confirmation by PCR

Suggested primer 1:ACGCACACACACGTTCTCTC
Suggested primer 2:ACTCGAGTTTGGAAGAGCCA