Insertion junction: LMJ.RY0402.111581_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.111581
Chromosome:chromosome 2
Location:4178444
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre02.g098400 5'UTR|outside_mRNA

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCGTTCATAACTCTGTTGCGGGTGCGAGC
Internal bar code:TTGACCCGACTGCACGCAACTG

Confirmation - LEAP-Seq

LEAP-Seq distance:660
LEAP-Seq percent confirming:98.7711
LEAP-Seq n confirming:643
LEAP-Seq n nonconfirming:8
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:AATGTTGATAGTCGCCTGCC
Suggested primer 2:CATGCGTGTAAGTACGGTGC