Insertion junction: LMJ.RY0402.111650_2

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.111650
Chromosome:chromosome 9
Location:2530010
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre09.g390957 (1 of 6) IPR001471//IPR016177 - AP2/ERF domain // DNA-binding domain CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AATTGCACGGCGGCGGGGTGCTGCAGGCGG
Internal bar code:GTTACGTTGGACCATGCGCACT

Confirmation - LEAP-Seq

LEAP-Seq distance:1113
LEAP-Seq percent confirming:33.2298
LEAP-Seq n confirming:214
LEAP-Seq n nonconfirming:430
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:AAAGCATCAAGATCATCGCC
Suggested primer 2:TCATTATTCGGTTTCACGCA