Insertion junction: LMJ.RY0402.111742_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.111742
Chromosome:chromosome 10
Location:3037943
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre10.g441300 (1 of 11) IPR001471//IPR016177//IPR031112 - AP2/ERF domain // DNA-binding domain // AP2-like ethylene-responsive transcription factor 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACTACTCTGAAGCTAGAGCATTGTTCAGGG
Internal bar code:GCACTCGACACGCTCAGGGTGG

Confirmation - LEAP-Seq

LEAP-Seq distance:597
LEAP-Seq percent confirming:99.4242
LEAP-Seq n confirming:1036
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:AGTGCAGCGGCTTTATTCAT
Suggested primer 2:TCTTCTTTGTGGGTGGAAGG