Insertion junction: LMJ.RY0402.111790_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.111790
Chromosome:chromosome 3
Location:8200300
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre03.g200050 CAL1 (1 of 2) PF13202//PF13833 - EF hand (EF-hand_5) // EF-hand domain pair (EF-hand_8); Calpain family cysteine protease 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGAACGCCACGCGCTGCGGCCGCGGTGAAG
Internal bar code:TCTCCACTAGCCGCTCACATTG

Confirmation - LEAP-Seq

LEAP-Seq distance:674
LEAP-Seq percent confirming:99.0148
LEAP-Seq n confirming:2814
LEAP-Seq n nonconfirming:28
LEAP-Seq n unique pos:22

Suggested primers for confirmation by PCR

Suggested primer 1:GTGAGGGTTTGAAGCAGAGC
Suggested primer 2:TAGGGGGCTTGGTATGACTG